STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF141Ring finger protein 141. (230 aa)    
Predicted Functional Partners:
LRRC18
Leucine rich repeat containing 18.
      
 0.664
MRVI1
Murine retrovirus integration site 1 homolog.
    
 
 0.640
RNF14
Ring finger protein 14.
     
 0.631
ENSVPAP00000004578
annotation not available
      
 0.615
INIP
INTS3 and NABP interacting protein.
      
 0.615
ENSVPAP00000003345
annotation not available
      
 0.598
ENSVPAP00000006040
annotation not available
      
 0.598
SPATA4
Spermatogenesis associated 4.
      
 0.589
TRIP12
Thyroid hormone receptor interactor 12.
     
 0.589
ENSVPAP00000009556
annotation not available
      
 0.589
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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