Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNRPB2Small nuclear ribonucleoprotein polypeptide B2. (225 aa)    
Predicted Functional Partners:
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
   
 0.999
SNRPC
Small nuclear ribonucleoprotein polypeptide C.
   
 0.998
ENSVPAP00000005534
annotation not available
   
 0.998
PHF5A
PHD finger protein 5A.
   
 0.997
SF3A3
Splicing factor 3a subunit 3.
   
 0.995
RBM17
RNA binding motif protein 17.
   
 0.995
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 0.994
ENSVPAP00000010392
annotation not available
   
 0.994
DHX15
DEAH-box helicase 15.
   
 0.994
SNRPD1
Small nuclear ribonucleoprotein D1 polypeptide.
   
 0.993
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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