Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000004239annotation not available (815 aa)    
Predicted Functional Partners:
EIF3A
Eukaryotic translation initiation factor 3 subunit A.
   
   0.844
SYAP1
Synapse associated protein 1.
    
   0.831
MAP7
Microtubule associated protein 7.
   
 
 0.774
KIF5B
Kinesin family member 5B.
   
 0.727
DHX36
DEAH-box helicase 36.
    
 0.725
KIF5C
Kinesin family member 5C.
   
 0.724
NOC3L
NOC3 like DNA replication regulator.
   
 
 0.716
RELCH
RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing.
    
 
 0.697
GALK2
Galactokinase 2.
      
 0.691
GPR149
G protein-coupled receptor 149.
   
 0.685
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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