Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CYYR1Cysteine and tyrosine rich 1. (134 aa)    
Predicted Functional Partners:
ENSVPAP00000006955
annotation not available
   
    0.910
ENSVPAP00000003365
annotation not available
   
    0.785
SHISAL1
Shisa like 1.
      
 0.663
SPARCL1
SPARC like 1.
   
    0.650
ADGRL4
Adhesion G protein-coupled receptor L4.
   
    0.643
PTPRB
Protein tyrosine phosphatase receptor type B.
   
  
 0.640
MAGI1
Membrane associated guanylate kinase, WW and PDZ domain containing 1.
    
   0.636
ENSVPAP00000005594
annotation not available
   
    0.635
ENSVPAP00000004853
annotation not available
      
 0.604
ENSVPAP00000009294
annotation not available
   
  
 0.594
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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