Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS1ADAM metallopeptidase with thrombospondin type 1 motif 1. (951 aa)    
Predicted Functional Partners:
VCAN
Versican.
    
 0.680
ENSVPAP00000001461
annotation not available
      
 0.673
GALNT3
Polypeptide N-acetylgalactosaminyltransferase 3.
      
 0.662
THBS1
Thrombospondin 1.
    
 0.662
DOP1B
DOP1 leucine zipper like protein B.
      
 0.661
MMP13
Matrix metallopeptidase 13.
    
 
 0.631
PTHLH
Parathyroid hormone like hormone.
      
 0.606
ADAMTSL1
ADAMTS like 1.
     
 0.604
ENSVPAP00000000491
annotation not available
      
 0.603
ENSVPAP00000009282
annotation not available
    
 0.603
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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