Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL48Mitochondrial ribosomal protein L48. (191 aa)    
Predicted Functional Partners:
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.988
MRPS30
Mitochondrial ribosomal protein S30.
   
 
 0.988
NDUFAB1
NADH:ubiquinone oxidoreductase subunit AB1.
   
  0.987
MRPL13
Mitochondrial ribosomal protein L13.
   
 
 0.985
ENSVPAP00000001701
annotation not available
   
 
 0.975
MRPL4
Mitochondrial ribosomal protein L4.
   
 
 0.975
MRPL45
Mitochondrial ribosomal protein L45.
   
 
 0.974
MRPL49
Mitochondrial ribosomal protein L49.
   
 
 0.973
ENSVPAP00000009358
annotation not available
   
 
 0.973
MRPL42
Mitochondrial ribosomal protein L42.
   
 
 0.972
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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