STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPIN3Spindlin family member 3. (258 aa)    
Predicted Functional Partners:
YRDC
yrdC N6-threonylcarbamoyltransferase domain containing.
    
   0.862
TOPORS
TOP1 binding arginine/serine rich protein.
    
 
 0.860
LOC102524784
spindlin-2B.
   
   0.815
AP3M2
Adaptor related protein complex 3 subunit mu 2.
      
 0.663
METTL25
Methyltransferase like 25.
      
 0.608
SETDB1
SET domain bifurcated histone lysine methyltransferase 1.
      
 0.588
TDRD3
Tudor domain containing 3.
      
 0.521
FOXA3
Forkhead box A3.
      
 0.508
CCNDBP1
Cyclin D1 binding protein 1.
      
 0.486
SSRP1
Structure specific recognition protein 1.
    
   0.471
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.