Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000004348annotation not available (1496 aa)    
Predicted Functional Partners:
RANBP2
RAN binding protein 2.
   
 0.975
THBS4
Thrombospondin 4.
    
 0.929
NEK2
NIMA related kinase 2.
   
  
 0.924
ENSVPAP00000011298
annotation not available
  
  
 0.912
HSDL2
Hydroxysteroid dehydrogenase like 2.
  
 0.895
ANAPC1
Anaphase promoting complex subunit 1.
      
 0.872
AASDH
Aminoadipate-semialdehyde dehydrogenase.
  
 
 0.862
NDUFAB1
NADH:ubiquinone oxidoreductase subunit AB1.
  
 0.849
PALB2
Partner and localizer of BRCA2.
  
 0.849
OPN1SW
Opsin 1, short wave sensitive.
      
 0.810
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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