Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TRPC1Transient receptor potential cation channel subfamily C member 1. (684 aa)    
Predicted Functional Partners:
STIM1
Stromal interaction molecule 1.
    
 0.998
TRPC4
Transient receptor potential cation channel subfamily C member 4.
  
 
0.993
STIM2
Stromal interaction molecule 2.
    
 0.973
TRPC5
Transient receptor potential cation channel subfamily C member 5.
    
 0.959
CAV1
Caveolin 1.
    
 
 0.944
ITPR2
Inositol 1,4,5-trisphosphate receptor type 2.
    
 0.921
PKD2
Polycystin 2, transient receptor potential cation channel.
    
 
 0.920
BMPR2
Bone morphogenetic protein receptor type 2.
    
 0.914
ENSVPAP00000005215
annotation not available
    
 0.901
TRPC7
Transient receptor potential cation channel subfamily C member 7.
    
 0.876
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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