Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYEF2Myelin expression factor 2. (546 aa)    
Predicted Functional Partners:
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.873
LUC7L3
LUC7 like 3 pre-mRNA splicing factor.
    
 
 0.869
POLR2K
RNA polymerase II subunit K.
   
 0.802
SLC12A1
Solute carrier family 12 member 1.
   
 
 0.766
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.751
SLC24A5
Solute carrier family 24 member 5.
   
  
 0.712
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.705
BTF3
Basic transcription factor 3.
    
 
 0.700
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.662
ENSVPAP00000007832
annotation not available
      
 0.661
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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