Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CILPCartilage intermediate layer protein. (1066 aa)    
Predicted Functional Partners:
ITGBL1
Integrin subunit beta like 1.
   
 
 0.855
HLA-DRA
Major histocompatibility complex, class II, DR alpha.
    
   0.773
IGF1R
Insulin like growth factor 1 receptor.
     
 0.752
ASPN
Asporin.
   
  
 0.712
IGF1
Insulin like growth factor 1.
   
 
 0.668
VDR
Vitamin D receptor.
      
 0.621
ANGPTL7
Angiopoietin like 7.
    
 
 0.620
ARHGAP6
Rho GTPase activating protein 6.
      
 0.607
FITM1
Fat storage inducing transmembrane protein 1.
      
 0.599
MTBP
MDM2 binding protein.
      
 0.585
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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