Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FRMD7FERM domain containing 7. (713 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
     
 0.716
VCAN
Versican.
      
 0.684
USP26
Ubiquitin specific peptidase 26.
      
 0.684
ABCA4
ATP binding cassette subfamily A member 4.
      
 0.682
HPS5
HPS5 biogenesis of lysosomal organelles complex 2 subunit 2.
      
 0.682
RAP2C
RAP2C, member of RAS oncogene family.
    
 0.660
GGCX
Gamma-glutamyl carboxylase.
      
 0.659
MBNL3
Muscleblind like splicing regulator 3.
      
 0.654
ASB15
Ankyrin repeat and SOCS box containing 15.
    
 0.647
WDR49
WD repeat domain 49.
      
 0.643
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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