STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PHTF1Putative homeodomain transcription factor 1. (762 aa)    
Predicted Functional Partners:
PHTF2
Putative homeodomain transcription factor 2.
    
   0.864
MSL3
MSL complex subunit 3.
    
 0.856
MSL2
MSL complex subunit 2.
    
 0.847
GPR156
G protein-coupled receptor 156.
    
   0.779
RSBN1
Round spermatid basic protein 1.
 
    
 0.772
SWT1
SWT1 RNA endoribonuclease homolog.
    
 
 0.707
ENSVPAP00000000574
annotation not available
    
 0.694
ENSVPAP00000004212
annotation not available
    
 0.694
KAT6B
Lysine acetyltransferase 6B.
    
 0.694
ENSVPAP00000010204
annotation not available
   
  
 0.673
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.