Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AP4B1Adaptor related protein complex 4 subunit beta 1. (734 aa)    
Predicted Functional Partners:
AP4E1
Adaptor related protein complex 4 subunit epsilon 1.
   
 0.999
AP4S1
Adaptor related protein complex 4 subunit sigma 1.
   
 0.999
ENSVPAP00000011781
annotation not available
   
 0.999
ITSN2
Intersectin 2.
    
 0.995
ENSVPAP00000003905
annotation not available
   
 
 0.987
ITSN1
Intersectin 1.
    
 0.972
AP2M1
Adaptor related protein complex 2 subunit mu 1.
   
 0.963
AP1G1
Adaptor related protein complex 1 subunit gamma 1.
   
 0.962
CLTC
Clathrin heavy chain.
   
 0.960
ZNF576
Zinc finger protein 576.
    
   0.959
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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