Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000004415annotation not available (1189 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 0.997
RIMS1
Regulating synaptic membrane exocytosis 1.
   
 0.956
RIMS3
Regulating synaptic membrane exocytosis 3.
   
 0.929
ENSVPAP00000004465
annotation not available
    
 0.867
SNAP25
Synaptosome associated protein 25.
   
 0.826
SYT1
Synaptotagmin 1.
   
 
 0.808
RAB3B
RAB3B, member RAS oncogene family.
   
 
 0.801
ENSVPAP00000008959
annotation not available
   
 0.797
ENSVPAP00000010768
annotation not available
   
 0.797
ENSVPAP00000001522
annotation not available
    
 0.794
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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