Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RESF1Retroelement silencing factor 1. (1722 aa)    
Predicted Functional Partners:
KLHL5
Kelch like family member 5.
    
   0.782
DOP1B
DOP1 leucine zipper like protein B.
      
 0.688
ENSVPAP00000005439
annotation not available
      
 0.685
ANKRD10
Ankyrin repeat domain 10.
      
 0.685
NPM3
Nucleophosmin/nucleoplasmin 3.
      
 0.670
DOP1A
DOP1 leucine zipper like protein A.
      
 0.662
DPM1
Dolichyl-phosphate mannosyltransferase subunit 1, catalytic.
      
 0.648
ENSVPAP00000004603
annotation not available
      
 0.627
USO1
USO1 vesicle transport factor.
      
 0.615
ENSVPAP00000000380
annotation not available
      
 0.609
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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