Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LEPROTL1Leptin receptor overlapping transcript like 1. (131 aa)    
Predicted Functional Partners:
TMEM50A
Transmembrane protein 50A.
   
 
 0.980
TMEM50B
Transmembrane protein 50B.
   
 
 0.829
ENSVPAP00000005029
annotation not available
      
 0.743
NAA30
N(alpha)-acetyltransferase 30, NatC catalytic subunit.
      
 0.719
LEPR
Leptin receptor.
    
 
 0.696
ZC3H8
Zinc finger CCCH-type containing 8.
      
 0.683
ENSVPAP00000010802
annotation not available
      
 0.674
RSPRY1
Ring finger and SPRY domain containing 1.
      
 0.664
LCTL
Lactase like.
      
 0.654
LRRC40
Leucine rich repeat containing 40.
      
 0.646
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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