Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC38A1Solute carrier family 38 member 1. (518 aa)    
Predicted Functional Partners:
SLC1A1
Solute carrier family 1 member 1.
   
 
 0.735
ENSVPAP00000005356
annotation not available
      
 0.688
RRAGB
Ras related GTP binding B.
    
 0.601
ENSVPAP00000003970
annotation not available
    
 0.569
ENSVPAP00000001083
annotation not available
    
 0.559
ENSVPAP00000007225
annotation not available
    
 
 0.550
RRAGD
Ras related GTP binding D.
    
 0.544
ENSVPAP00000001269
annotation not available
    
  0.538
RRAGC
Ras related GTP binding C.
    
 0.537
SERTM1
Serine rich and transmembrane domain containing 1.
      
 0.523
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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