Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CDK16Cyclin dependent kinase 16. (492 aa)    
Predicted Functional Partners:
CCNYL1
Cyclin Y like 1.
   
 
 0.968
YWHAZ
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta.
    
 0.917
BRCA1
BRCA1 DNA repair associated.
   
 0.858
CDK17
Cyclin dependent kinase 17.
   
   0.843
INTU
Inturned planar cell polarity protein.
   
 0.816
CDC20B
Cell division cycle 20B.
   
 0.816
CDC6
Cell division cycle 6.
   
 0.810
CDK14
Cyclin dependent kinase 14.
    
   0.810
PLK2
Polo like kinase 2.
   
 0.809
CCNG2
Cyclin G2.
   
 0.808
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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