Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000004453annotation not available (265 aa)    
Predicted Functional Partners:
ENSVPAP00000001185
annotation not available
 
     
0.900
ENSVPAP00000011511
annotation not available
   
 
 0.885
NMD3
NMD3 ribosome export adaptor.
   
 
 0.881
HECTD1
HECT domain E3 ubiquitin protein ligase 1.
    
 
 0.864
LSG1
Large 60S subunit nuclear export GTPase 1.
   
 
 0.852
EIF6
Eukaryotic translation initiation factor 6.
   
 
 0.795
DNAJC21
DnaJ heat shock protein family (Hsp40) member C21.
   
 
 0.743
GNL2
G protein nucleolar 2.
   
 
 0.733
EBNA1BP2
EBNA1 binding protein 2.
   
 
 0.732
ENSVPAP00000007776
annotation not available
   
 
 0.715
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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