Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CIPCCLOCK interacting pacemaker. (325 aa)    
Predicted Functional Partners:
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
    
 0.993
ENSVPAP00000005500
annotation not available
    
 0.974
ENSVPAP00000001147
annotation not available
    
 0.919
ENSVPAP00000001946
annotation not available
    
 0.919
CLOCK
Clock circadian regulator.
    
 0.919
ZMYM4
Zinc finger MYM-type containing 4.
    
   0.769
ASZ1
Ankyrin repeat, SAM and basic leucine zipper domain containing 1.
      
 0.657
ARNT
Aryl hydrocarbon receptor nuclear translocator.
    
 0.656
NR1D2
Nuclear receptor subfamily 1 group D member 2.
      
 0.615
KCNJ1
Potassium inwardly rectifying channel subfamily J member 1.
   
  
 0.608
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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