SH2D3C protein (Vicugna pacos) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

SH2D3C

SH2 domain containing 3C. (845 aa)

Predicted Functional Partners:

ENSVPAP00000010337

0.945

NEDD9

0.941

ENSVPAP00000003559

0.932

CASS4

0.863

ENSVPAP00000004793

0.791

KCNE4

0.782

FBXL20

0.759

ENSVPAP00000004627

0.747

ENSVPAP00000001972

0.678

KCNK10

0.673

Your Current Organism:

Vicugna pacos

NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CASS4	ENSVPAP00000003559	ENSVPAP00000011287	ENSVPAP00000003559	Cas scaffold protein family member 4.	annotation not available	0.661
CASS4	SH2D3C	ENSVPAP00000011287	ENSVPAP00000004469	Cas scaffold protein family member 4.	SH2 domain containing 3C.	0.863
ENSVPAP00000001972	SH2D3C	ENSVPAP00000001972	ENSVPAP00000004469	annotation not available	SH2 domain containing 3C.	0.678
ENSVPAP00000003559	CASS4	ENSVPAP00000003559	ENSVPAP00000011287	annotation not available	Cas scaffold protein family member 4.	0.661
ENSVPAP00000003559	ENSVPAP00000004793	ENSVPAP00000003559	ENSVPAP00000004793	annotation not available	annotation not available	0.547
ENSVPAP00000003559	ENSVPAP00000010337	ENSVPAP00000003559	ENSVPAP00000010337	annotation not available	annotation not available	0.964
ENSVPAP00000003559	KCNE4	ENSVPAP00000003559	ENSVPAP00000006366	annotation not available	Potassium voltage-gated channel subfamily E regulatory subunit 4.	0.476
ENSVPAP00000003559	NEDD9	ENSVPAP00000003559	ENSVPAP00000004411	annotation not available	Neural precursor cell expressed, developmentally down-regulated 9.	0.920
ENSVPAP00000003559	SH2D3C	ENSVPAP00000003559	ENSVPAP00000004469	annotation not available	SH2 domain containing 3C.	0.932
ENSVPAP00000004627	KCNE4	ENSVPAP00000004627	ENSVPAP00000006366	annotation not available	Potassium voltage-gated channel subfamily E regulatory subunit 4.	0.845
ENSVPAP00000004627	SH2D3C	ENSVPAP00000004627	ENSVPAP00000004469	annotation not available	SH2 domain containing 3C.	0.747
ENSVPAP00000004793	ENSVPAP00000003559	ENSVPAP00000004793	ENSVPAP00000003559	annotation not available	annotation not available	0.547
ENSVPAP00000004793	FBXL20	ENSVPAP00000004793	ENSVPAP00000009841	annotation not available	F-box and leucine rich repeat protein 20.	0.522
ENSVPAP00000004793	KCNE4	ENSVPAP00000004793	ENSVPAP00000006366	annotation not available	Potassium voltage-gated channel subfamily E regulatory subunit 4.	0.923
ENSVPAP00000004793	SH2D3C	ENSVPAP00000004793	ENSVPAP00000004469	annotation not available	SH2 domain containing 3C.	0.791
ENSVPAP00000010337	ENSVPAP00000003559	ENSVPAP00000010337	ENSVPAP00000003559	annotation not available	annotation not available	0.964
ENSVPAP00000010337	SH2D3C	ENSVPAP00000010337	ENSVPAP00000004469	annotation not available	SH2 domain containing 3C.	0.945
FBXL20	ENSVPAP00000004793	ENSVPAP00000009841	ENSVPAP00000004793	F-box and leucine rich repeat protein 20.	annotation not available	0.522
FBXL20	KCNK10	ENSVPAP00000009841	ENSVPAP00000003921	F-box and leucine rich repeat protein 20.	Potassium two pore domain channel subfamily K member 10.	0.717
FBXL20	SH2D3C	ENSVPAP00000009841	ENSVPAP00000004469	F-box and leucine rich repeat protein 20.	SH2 domain containing 3C.	0.759