Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDK9Cyclin dependent kinase 9. (340 aa)    
Predicted Functional Partners:
CCNT2
Cyclin T2.
   
 0.999
CCNT1
Cyclin T1.
   
 0.999
AFF4
AF4/FMR2 family member 4.
    
 0.999
ENSVPAP00000008227
annotation not available
    
 0.996
ELL2
Elongation factor for RNA polymerase II 2.
    
 0.993
AFF1
AF4/FMR2 family member 1.
    
 0.992
CCNK
Cyclin K.
   
 0.992
LARP7
La ribonucleoprotein 7, transcriptional regulator.
   
 0.992
ENSVPAP00000005996
annotation not available
    
 
 0.991
SUPT4H1
SPT4 homolog, DSIF elongation factor subunit.
     
 0.991
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.