Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TENT5ATerminal nucleotidyltransferase 5A. (336 aa)    
Predicted Functional Partners:
BCCIP
BRCA2 and CDKN1A interacting protein.
    
 
 0.952
ELOVL4
ELOVL fatty acid elongase 4.
      
 0.733
FAM162B
Family with sequence similarity 162 member B.
      
 0.728
PLK4
Polo like kinase 4.
    
 
 0.669
ENSVPAP00000006338
annotation not available
      
 0.651
TMEM167A
Transmembrane protein 167A.
      
 0.632
ENSVPAP00000011339
annotation not available
      
 0.615
MBTPS2
Membrane bound transcription factor peptidase, site 2.
      
 0.614
WDR7
WD repeat domain 7.
      
 0.569
SLC16A1
Solute carrier family 16 member 1.
    
 
 0.532
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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