STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TBRG1Transforming growth factor beta regulator 1. (411 aa)    
Predicted Functional Partners:
COPS2
COP9 signalosome subunit 2.
   
  
 0.787
KDM6A
Lysine demethylase 6A.
   
 0.780
ENSVPAP00000007471
annotation not available
    
   0.774
ENSVPAP00000011631
annotation not available
      
 0.765
KNTC1
Kinetochore associated 1.
      
 0.748
FBXO3
F-box protein 3.
      
 0.742
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.736
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.721
ENSVPAP00000009984
annotation not available
      
 0.711
ENSVPAP00000010041
annotation not available
   
 
 0.700
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.