Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CNN3Calponin 3. (310 aa)    
Predicted Functional Partners:
DST
Dystonin.
      
 0.922
ENSVPAP00000000769
annotation not available
    
 
 0.917
ENSVPAP00000003396
annotation not available
    
 
 0.860
ENSVPAP00000006083
annotation not available
      
 0.858
DSP
Desmoplakin.
      
 0.841
RSPH1
Radial spoke head component 1.
    
 
 0.823
DSTN
Destrin, actin depolymerizing factor.
   
 
 0.812
LMO7
LIM domain 7.
    
 
 0.802
CALB2
Calbindin 2.
   
 0.795
ENSVPAP00000000768
annotation not available
    
 
 0.770
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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