STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000004530annotation not available (248 aa)    
Predicted Functional Partners:
VPS35L
VPS35 endosomal protein sorting factor like.
    
 
 0.967
COMMD8
COMM domain containing 8.
    
 
 0.967
COMMD2
COMM domain containing 2.
    
 
 0.967
VPS29
VPS29 retromer complex component.
  
 
 0.961
VPS26C
VPS26 endosomal protein sorting factor C.
    
 
 0.961
COMMD1
Copper metabolism domain containing 1.
   
 
 0.961
COMMD10
COMM domain containing 10.
    
 
 0.957
COMMD6
COMM domain containing 6.
    
 
 0.950
ENSVPAP00000009221
annotation not available
    
 
 0.909
ENSVPAP00000003396
annotation not available
  
 0.872
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.