Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000004531annotation not available (227 aa)    
Predicted Functional Partners:
TMEM126B
Transmembrane protein 126B.
    
 0.697
MTFR1
Mitochondrial fission regulator 1.
      
 0.664
SLC25A36
Solute carrier family 25 member 36.
      
 0.664
SFXN2
Sideroflexin 2.
    
 
 0.634
ENSVPAP00000006478
annotation not available
      
 0.620
TSFM
Ts translation elongation factor, mitochondrial.
   
  
 0.615
CCDC18
Coiled-coil domain containing 18.
      
 0.615
COX15
Cytochrome c oxidase assembly homolog COX15.
   
 
 0.601
NDUFB6
NADH:ubiquinone oxidoreductase subunit B6.
   
 
 0.582
ENSVPAP00000000646
annotation not available
   
  
 0.539
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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