Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DNTTDNA nucleotidylexotransferase. (485 aa)    
Predicted Functional Partners:
XRCC5
X-ray repair cross complementing 5.
    
 0.946
XRCC6
X-ray repair cross complementing 6.
    
 0.941
PCNA
Proliferating cell nuclear antigen.
    
 0.856
LIG4
DNA ligase 4.
   
 0.818
RAG1
Recombination activating 1.
   
  
 0.813
SPEF2
Sperm flagellar 2.
    
   0.803
LIG3
DNA ligase 3.
   
 0.769
REC114
REC114 meiotic recombination protein.
    
 0.705
PNKP
Polynucleotide kinase 3'-phosphatase.
    
 0.705
ENSVPAP00000004408
annotation not available
  
 
 0.701
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.