Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TLL2Tolloid like 2. (959 aa)    
Predicted Functional Partners:
PCOLCE2
Procollagen C-endopeptidase enhancer 2.
    
 0.827
BMP2
Bone morphogenetic protein 2.
    
 
 0.686
COL5A2
Collagen type V alpha 2 chain.
   
 0.678
COL3A1
Collagen type III alpha 1 chain.
   
 0.664
LOXL4
Lysyl oxidase like 4.
    
 0.646
MSTN
Myostatin.
    
 
 0.615
TTC14
Tetratricopeptide repeat domain 14.
      
 0.607
NLN
Neurolysin.
      
 0.597
MSR1
Macrophage scavenger receptor 1.
     
 0.594
ENSVPAP00000008179
annotation not available
     
  0.576
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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