Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000004553annotation not available (367 aa)    
Predicted Functional Partners:
RNF7
Ring finger protein 7.
     
 0.631
FOXP2
Forkhead box P2.
    
 0.628
TFB2M
Transcription factor B2, mitochondrial.
    
 
 0.626
ENSVPAP00000003396
annotation not available
    
 0.582
ENSVPAP00000009232
annotation not available
    
 
 0.578
ENSVPAP00000007089
annotation not available
    
 
 0.572
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.530
DNTT
DNA nucleotidylexotransferase.
    
 
 0.527
GINS3
GINS complex subunit 3.
      
 0.524
ENSVPAP00000000481
annotation not available
      
 0.509
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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