Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLDN12Claudin 12. (244 aa)    
Predicted Functional Partners:
OCLN
Occludin.
     
 0.990
CLDN1
Claudin 1.
     
 0.982
CLDN10
Claudin 10.
     
 0.974
CLDN20
Claudin 20.
     
 0.974
CLDN16
Claudin 16.
     
 0.972
CLDN17
Claudin 17.
     
 0.972
ENSVPAP00000007434
annotation not available
     
 0.966
TJP1
Tight junction protein 1.
     
 0.959
CDH17
Cadherin 17.
      
 0.916
CLDN8
Claudin 8.
     
 0.905
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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