Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TDO2Tryptophan 2,3-dioxygenase. (351 aa)    
Predicted Functional Partners:
KYNU
Kynureninase.
  
  
 0.936
DPM1
Dolichyl-phosphate mannosyltransferase subunit 1, catalytic.
    
   0.893
TAT
Tyrosine aminotransferase.
  
 
 0.883
IDO1
Indoleamine 2,3-dioxygenase 1.
   
  
 0.879
IDO2
Indoleamine 2,3-dioxygenase 2.
   
  
 0.862
KYAT3
Kynurenine aminotransferase 3.
  
 
 0.861
METTL11B
Methyltransferase like 11B.
    
 
 0.830
ZC3H8
Zinc finger CCCH-type containing 8.
    
   0.806
ZC3H6
Zinc finger CCCH-type containing 6.
    
   0.806
KMO
Kynurenine 3-monooxygenase.
     
 0.758
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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