Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL45Mitochondrial ribosomal protein L45. (306 aa)    
Predicted Functional Partners:
MRPL15
Mitochondrial ribosomal protein L15.
   
   0.987
NDUFAB1
NADH:ubiquinone oxidoreductase subunit AB1.
   
 0.985
MRPS30
Mitochondrial ribosomal protein S30.
   
 
 0.983
MRPL4
Mitochondrial ribosomal protein L4.
   
 
 0.979
MRPL22
Mitochondrial ribosomal protein L22.
   
 
 0.975
MRPL49
Mitochondrial ribosomal protein L49.
   
 
 0.975
MRPL51
Mitochondrial ribosomal protein L51.
   
 
 0.975
MRPL48
Mitochondrial ribosomal protein L48.
   
 
 0.974
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.974
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.974
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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