STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GOT1Glutamic-oxaloacetic transaminase 1. (367 aa)    
Predicted Functional Partners:
GOT2
Glutamic-oxaloacetic transaminase 2.
  
 
0.988
ENSVPAP00000009513
annotation not available
   
 0.987
MDH1
Malate dehydrogenase 1.
   
 0.985
LDHA
Lactate dehydrogenase A.
   
 0.984
ENSVPAP00000007023
annotation not available
   
 0.981
ASNS
Asparagine synthetase (glutamine-hydrolyzing).
   
 0.981
FH
Fumarate hydratase.
   
 0.977
TAT
Tyrosine aminotransferase.
  
 0.976
MPST
Mercaptopyruvate sulfurtransferase.
  
 
 0.973
TST
Thiosulfate sulfurtransferase.
  
 
 0.970
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.