Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CRABP2Cellular retinoic acid binding protein 2. (122 aa)    
Predicted Functional Partners:
TTR
Transthyretin.
   
 
 0.853
RARB
Retinoic acid receptor beta.
    
 0.785
CYP26A1
Cytochrome P450 family 26 subfamily A member 1.
     
 0.784
IFT80
Intraflagellar transport 80.
     
 0.750
KIF3A
Kinesin family member 3A.
      
 0.739
IFT81
Intraflagellar transport 81.
      
 0.736
BBS4
Bardet-Biedl syndrome 4.
    
 
 0.724
SYCP2
Synaptonemal complex protein 2.
      
 0.719
BBS9
Bardet-Biedl syndrome 9.
      
 0.691
ENSVPAP00000003218
annotation not available
      
 0.689
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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