Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000004659annotation not available (199 aa)    
Predicted Functional Partners:
DNAJC7
DnaJ heat shock protein family (Hsp40) member C7.
   
 0.970
CHORDC1
Cysteine and histidine rich domain containing 1.
    
 
 0.830
TARS1
threonyl-tRNA synthetase 1.
   
   0.762
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.743
FUS
FUS RNA binding protein.
    
 
 0.724
ENSVPAP00000003360
annotation not available
      
 0.682
ENSVPAP00000010774
annotation not available
    
 0.667
ENSVPAP00000006166
annotation not available
   
 0.652
CDC37L1
Cell division cycle 37 like 1.
   
 
 0.647
ENSVPAP00000003396
annotation not available
   
 0.646
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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