Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TP53TG5TP53 target 5. (269 aa)    
Predicted Functional Partners:
PSME3IP1
Proteasome activator subunit 3 interacting protein 1.
    
   0.862
ACTL7A
Actin like 7A.
      
 0.749
GAPT
GRB2 binding adaptor protein, transmembrane.
      
 0.681
DTNBP1
Dystrobrevin binding protein 1.
      
 0.678
ENSVPAP00000003377
annotation not available
      
 0.667
ENSVPAP00000001363
annotation not available
      
 0.665
FAM102B
Family with sequence similarity 102 member B.
      
 0.615
ENSVPAP00000002263
annotation not available
      
 0.611
PKIA
cAMP-dependent protein kinase inhibitor alpha.
      
 0.599
ENSVPAP00000001134
annotation not available
      
 0.590
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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