Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NIPSNAP2Nipsnap homolog 2. (255 aa)    
Predicted Functional Partners:
MTHFSD
Methenyltetrahydrofolate synthetase domain containing.
   
    0.859
ENSVPAP00000007276
annotation not available
    
 
 0.851
OSBPL11
Oxysterol binding protein like 11.
   
  0.788
ENSVPAP00000002381
annotation not available
    
 
 0.779
ENSVPAP00000005078
annotation not available
 
      0.765
SNU13
Small nuclear ribonucleoprotein 13.
   
  
 0.738
SMC1B
Structural maintenance of chromosomes 1B.
   
    0.702
ASF1A
Anti-silencing function 1A histone chaperone.
   
    0.674
NUDCD1
NudC domain containing 1.
   
   0.655
PSMD1
Proteasome 26S subunit, non-ATPase 1.
   
    0.650
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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