Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000004706annotation not available (241 aa)    
Predicted Functional Partners:
RAB2B
RAB2B, member RAS oncogene family.
    
 0.647
RAB2A
RAB2A, member RAS oncogene family.
    
 0.647
TNC
Tenascin C.
    
  0.635
TNN
Tenascin N.
    
  0.635
TNR
Tenascin R.
    
  0.635
ENSVPAP00000009147
annotation not available
      
 0.508
ADAMTS5
ADAM metallopeptidase with thrombospondin type 1 motif 5.
    
 0.487
HAPLN1
Hyaluronan and proteoglycan link protein 1.
    
  0.469
ENSVPAP00000008318
annotation not available
  
 
 0.468
NAA25
N(alpha)-acetyltransferase 25, NatB auxiliary subunit.
    
   0.458
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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