Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SRXN1Sulfiredoxin 1. (139 aa)    
Predicted Functional Partners:
ENSVPAP00000003016
annotation not available
   
 0.977
PRDX1
Peroxiredoxin 1.
   
 0.977
PRDX3
Peroxiredoxin 3.
   
 0.901
PRDX4
Peroxiredoxin 4.
   
 0.901
ENSVPAP00000004530
annotation not available
   
 0.844
ENSVPAP00000011718
annotation not available
   
 0.844
NFE2L2
Nuclear factor, erythroid 2 like 2.
    
 0.843
PRDX6
Peroxiredoxin 6.
   
 0.797
ENSVPAP00000008801
annotation not available
   
  
 0.747
ENSVPAP00000008865
annotation not available
      
 0.689
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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