Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CALB1Calbindin 1. (234 aa)    
Predicted Functional Partners:
S100G
S100 calcium binding protein G.
    
 0.880
SST
Somatostatin.
   
  
 0.873
ENSVPAP00000000769
annotation not available
    
 
 0.872
ENSVPAP00000002547
annotation not available
   
 0.839
KCNQ5
Potassium voltage-gated channel subfamily Q member 5.
    
 0.804
GRIK1
Glutamate ionotropic receptor kainate type subunit 1.
   
 0.782
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.757
ENSVPAP00000002916
annotation not available
    
 0.749
RHO
Rhodopsin.
    
 
 0.731
RYR2
Ryanodine receptor 2.
    
 
 0.722
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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