Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRRC2CProline rich coiled-coil 2C. (2759 aa)    
Predicted Functional Partners:
RBM25
RNA binding motif protein 25.
   
    0.981
SON
SON DNA binding protein.
   
   0.980
UBAP2L
Ubiquitin associated protein 2 like.
   
 
 0.974
EIF3A
Eukaryotic translation initiation factor 3 subunit A.
   
   0.973
FMR1
FMRP translational regulator 1.
   
 
 0.903
CSDE1
Cold shock domain containing E1.
   
 
 0.841
EIF3H
Eukaryotic translation initiation factor 3 subunit H.
    
 
 0.841
BPTF
Bromodomain PHD finger transcription factor.
   
  
 0.838
UBAP2
Ubiquitin associated protein 2.
   
 
 0.830
G3BP1
G3BP stress granule assembly factor 1.
   
 
 0.825
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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