Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CD53CD53 molecule. (218 aa)    
Predicted Functional Partners:
ENSVPAP00000003667
annotation not available
   
 0.848
LCP1
Lymphocyte cytosolic protein 1.
   
    0.797
ENSVPAP00000007493
annotation not available
   
  
 0.781
EVI2B
Ecotropic viral integration site 2B.
   
  
 0.758
ENSVPAP00000001673
annotation not available
   
  
 0.725
ENSVPAP00000007000
annotation not available
    
 
 0.628
CD101
CD101 molecule.
     
 0.609
ENSVPAP00000004969
annotation not available
   
  
 0.567
ENSVPAP00000005381
annotation not available
   
 0.558
ITGB1
Integrin subunit beta 1.
   
 0.546
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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