Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KCTD3Potassium channel tetramerization domain containing 3. (789 aa)    
Predicted Functional Partners:
LRRC40
Leucine rich repeat containing 40.
    
   0.964
CUL3
Cullin 3.
    
 0.925
NUDCD1
NudC domain containing 1.
    
   0.894
TNFAIP3
TNF alpha induced protein 3.
    
   0.867
SNX27
Sorting nexin 27.
    
   0.816
PIH1D2
PIH1 domain containing 2.
    
   0.776
GPATCH2
G-patch domain containing 2.
      
 0.759
MTM1
Myotubularin 1.
      
 0.758
RRP15
Ribosomal RNA processing 15 homolog.
      
 0.748
KCTD19
Potassium channel tetramerization domain containing 19.
    
 
 0.728
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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