Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPB2Carboxypeptidase B2. (423 aa)    
Predicted Functional Partners:
CPB1
Carboxypeptidase B1.
  
  
 
0.904
ENSVPAP00000005613
annotation not available
     
 0.888
SERPINC1
Serpin family C member 1.
   
 
 0.861
CPN1
Carboxypeptidase N subunit 1.
   
 
 0.854
ENSVPAP00000009159
annotation not available
  
 
 0.825
ENSVPAP00000001042
annotation not available
   
 
 0.799
ENSVPAP00000008650
annotation not available
   
 
 0.764
ENSVPAP00000010354
annotation not available
   
 
 0.754
C5
Complement C5.
   
 0.747
ENSVPAP00000003593
annotation not available
   
  
 0.712
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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