Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNHIT2Zinc finger HIT-type containing 2. (398 aa)    
Predicted Functional Partners:
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
    
 
 0.982
ECD
Ecdysoneless cell cycle regulator.
    
 
 0.967
CKAP5
Cytoskeleton associated protein 5.
    
   0.965
SNRNP40
Small nuclear ribonucleoprotein U5 subunit 40.
    
 
 0.960
ENTHD1
ENTH domain containing 1.
      
 0.901
EAPP
E2F associated phosphoprotein.
    
 
 0.887
EIF2D
Eukaryotic translation initiation factor 2D.
    
   0.857
VPS36
Vacuolar protein sorting 36 homolog.
   
   0.854
SNU13
Small nuclear ribonucleoprotein 13.
    
 
 0.795
TTC27
Tetratricopeptide repeat domain 27.
    
 
 0.733
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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