Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCL20C-C motif chemokine ligand 20. (96 aa)    
Predicted Functional Partners:
ENSVPAP00000002941
annotation not available
   
 0.946
CCR8
C-C motif chemokine receptor 8.
     
 0.924
CCR2
C-C motif chemokine receptor 2.
     
 0.886
CCR1
C-C motif chemokine receptor 1.
     
 0.884
CXCR4
C-X-C motif chemokine receptor 4.
     
 0.843
CXCL10
C-X-C motif chemokine ligand 10.
   
 0.807
CCR9
C-C motif chemokine receptor 9.
     
 0.806
LOC102535531
C-C motif chemokine 3.
    
 0.773
CXCL6
C-X-C motif chemokine ligand 6.
   
 0.765
CXCL9
C-X-C motif chemokine ligand 9.
    
 0.762
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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