Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PID1Phosphotyrosine interaction domain containing 1. (231 aa)    
Predicted Functional Partners:
TFCP2
Transcription factor CP2.
      
 0.687
N4BP2L1
NEDD4 binding protein 2 like 1.
      
 0.677
KDELR3
KDEL endoplasmic reticulum protein retention receptor 3.
      
 0.645
PAFAH2
Platelet activating factor acetylhydrolase 2.
   
  
 0.619
MED13
Mediator complex subunit 13.
      
 0.615
KCTD20
Potassium channel tetramerization domain containing 20.
      
 0.615
SDHAF2
Succinate dehydrogenase complex assembly factor 2.
      
 0.614
UGGT1
UDP-glucose glycoprotein glucosyltransferase 1.
      
 0.607
ELMO1
Engulfment and cell motility 1.
      
 0.589
PCOLCE2
Procollagen C-endopeptidase enhancer 2.
    
 
 0.572
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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