Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
JKAMPJNK1/MAPK8 associated membrane protein. (310 aa)    
Predicted Functional Partners:
CCDC175
Coiled-coil domain containing 175.
      
 0.904
DUSP10
Dual specificity phosphatase 10.
      
 0.615
AP3S1
Adaptor related protein complex 3 subunit sigma 1.
      
 0.551
PDE1A
Phosphodiesterase 1A.
      
 0.523
PDE1C
Phosphodiesterase 1C.
      
 0.523
RTN1
Reticulon 1.
      
 0.522
SNX24
Sorting nexin 24.
      
 0.520
ASCC1
Activating signal cointegrator 1 complex subunit 1.
      
 0.515
CLVS2
Clavesin 2.
      
 0.506
MAPKAP1
MAPK associated protein 1.
      
 0.501
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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